YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|115491939, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.53
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPHAMLFCPL SWTRSFHSLP LFIRRFEYSF IQAPVNTQPT AFLRSRTFHR LTPSPSGNPA  60
   61 FNHEQSNDAE AEYDRLRDLA RQEASKRNSC FQRSQEAYTS GDGARAKELS EQGKAHGRKM 120
  121 DEYNKQASEF IFRENNANGR VAADTIDLHG QFVEEAEEIL EERIKYAKAH GQTHLHVIVG 180
  181 KGNHSAHHVQ KIKPRVEQVC RELGLQYTTE ENAGRIYVNL TGGPADLAAA GGSSGGHHTP 240
  241 SHHQYPGQQS HPQHQQHHQQ QQQQDPVEQV VNAVLPRVMR KLEKACCVVM

Type	Start	End	Confidence
Signal Peptide	1	15	0.52
N-region	1	6
H-region	7	12
C-region	13	15
Cleavage Site	15	16
Non-Cytoplasmic	16	290	0.99