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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114197360, gi...
Protein type: Transmembrane
Type Confidence: 0.65
Topology Confidence: 0.59
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAQTQRSRYL KTGAIIGALL MMIFWLSPSR PSHFGGYGKP PANATPLTDR CSKPHDPSKP  60
   61 LIQYALMIDA GSQGSRIHVY RFNNCGPTPE LEHEEFAQTE KRPGGGSSGL SSYKEDAEGA 120
  121 ARSLDPLMQV AMRTVPDEYK SCSPVAVKAT AGLRMLGPEL SENILQAVRT RLETVYPFPV 180
  181 VSREKGGVEI MDGSDEGVYA WITTNYLLGK IGGPDETPTA AVFDLGGGST QIVFQPTFEN 240
  241 SKSGGMPEHL APGDHKYDLE FGGRHFELYQ HSHLGYGLMA ARDTVHKAVV EAKLAANPKD 300
  301 TSWVNQPISN PCIGPGMERD VKLEFPTEHP LGPGPVTFKM VGPKEGLSAA VQCRGLAEKI 360
  361 LNKDAECKLA PCSFNGVHQP SLEKTFSRED VYIFSYFFDR TKPLGMPDSF TLDELHQLTA 420
  421 NVCAGESNWS VFEGIEGALD ELRDRPEWCL DLNFMLGLLH TGYEMPLSRE VKIAKKIKNN 480
  481 ELGWCLGASL PLLSQESGWT CRVKEIS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle