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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|115491707, gi...
Protein type: Transmembrane
Type Confidence: 0.67
Topology Confidence: 0.61
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGRILSHRL VPLLRTGNLA RHMHNAGART GGLLRADGGA ALRGRSWPVG ANAIHNVPAV  60
   61 RAISFSRMLP KLALKLVRVP AMLGGATVAG LAYFQYQATQ AGNYAMDVLR RAGETAGGAA 120
  121 STLFSEIQGV AEQTQRGWQK TTEDIEVPEW LQKILRMDEA AQSGGGGSSG GGQQPNESRV 180
  181 GASTAAGAAA GSVLGYEQSD EEDQRLKRDM AENDQMMLLT RKMIEIRNIL QTVGQSNTLT 240
  241 LPSIVVIGSQ SSGKSSVLEA IVGHEFLPKG SNMVTRRPIE LTLVNTPNGQ AEYGEFPALG 300
  301 LGKITDFSQI QRTLTDLNLA VPEKDCVSDD PIQLSIYSPN VPDLSLIDLP GYIQVAGHDQ 360
  361 PAELKQKISD LCDKYIQAPN VILAISAADV DLANSTALRA SRRVDPRGER TIGVITKMDL 420
  421 VDPDRGYSIL SDKKYPLRLG YVGVVSRIPQ TTALFSRGSG NITSAILRNE NAYFSAHPSE 480
  481 FGPQSGVSVG VNTLRDKLMH VLEQTMASSL AGTRDAISQE LEEATYEFKV QYNDRPLSAE 540
  541 SYLAESLDSF KHSFKAFAES FGRPQVREML KHELDQRVMD ILAQRYWNKP VEDLTPPMVE 600
  601 PDPLSDLPKA DADSQYWRRK LDASTSALTK LGIGRLATTV VANAIQSHVD RLLANSTFAT 660
  661 HPYAQKQIED AYTSILNDRF FSTSDQVENC IKPYKFEIEV EDPEWAKGRE NVSKVLKEEL 720
  721 RACEAAYKRV EESVGKRKLK DVMSFVDRVR KGDVVLEGDG AGGAGGFSSA LLAKGRESVF 780
  781 LRDRADLIKM RLLAVRSKQC ASKKNKYYCP EVFLDVVADK LTSTAVLFLN VELLSEFYYN 840
  841 FPRELDMRLG RHLSDAEVER FAREDPRVRK HLDVIRKKEL LELALQKIES IRQLDGRSKR 900
  901 NSDRPLPSKE QRSRGWNIF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle