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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|115385262, gi...
Protein type: Transmembrane
Type Confidence: 0.95
Topology Confidence: 0.47
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSASALPSHL RAPANEAANA GSFGKHHGKS QSHMLTFAPF PFPVLSHPLG PMAITLALDH  60
   61 IVDCLLVYGI LTVICRRGIF TPEWMAASLE VYCLIRLFKA LDCLPGQRIV ALLRGPSLKD 120
  121 HLRLFTSLLP LGVPVRLASS QISALPRFPP LFSHVPPKFI WLPLVILYLM LTALSLHQAF 180
  181 ENASTSVAAS QMRNALNALA ETVPDPSERK RFEAEMDNFF ALFRRFLNDK AKGNVVNWDR 240
  241 IAPPQPSQVV DYNDLGSEAS VEFLNKLAVV KLNGGLGTSM GCVGPKSVIE VREGMSFLDL 300
  301 SVRQIEHLNR TFNVNVPFVL MNSFNTDQDT QSIIKKYQGH NVDIITFNQS RYPRIIKDSL 360
  361 QPAPKSYDAP LQDWYPPGHG DVFESLYNSG TLDKLLERGV EYIFLSNADN LGAVVDLRIL 420
  421 QHMVDTQAEY IMELTDKTKA DVKGGTIIDY EGKVRLLEIA QVPKEHVNEF KSIKKFKYFN 480
  481 TNNIWMNLRA IKRVVEENEL EMEIIANEKS IPADKKGEAD QAIYQLETAV GAAIRHFKNA 540
  541 HGVNVPRRRF LPVKTCSDLL LVKSDLYRLE HGQLVMDPNR FGGVPVIKLG SDFKKVSDFQ 600
  601 KRIPSIPRIV ELDHLTITGA VNLGRNVTLK GTVIIVATEG STIDVPPGSV LENCVVQGSL 660
  661 RILEH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle