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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|115384930, gi...
Protein type: Transmembrane
Type Confidence: 0.57
Topology Confidence: 0.47
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSVTMRSASL MRGNSVLRPG LIARPRFPGA LGAASTASLR FNGRGLPSHV QAIALLVSHQ  60
   61 RGYATEQSTS HSNPSDLPPP GFNAEQAKKP IPSNTEQSTD RNQQLDRRPD QSVASKADGK 120
  121 STPDTAVSKA SEENKKVTEE KKEQKKLTIG QKIKKEAQHY WDGTKLLATE VRISSRLALK 180
  181 MAAGYELSRR EHRQLQRTVK DLGRLVPFSM FIIIPFAELL LPVALKLFPN LLPSTYEGQN 240
  241 AREKKALNLS STRKEVSTFL KDTLRESGLP VTAATVKNEE FAEFFKKIRT TGETPSTEDV 300
  301 IKVCKIFKDD LTLDNLSRPQ LVGICKYMNL NSFGTDAMLR YNIRHRMRQI KRDDRAIFYE 360
  361 GVSSLSVPEL QMACASRGIR THGVSPARLR EDLSMWLDLR LKQGVPSTLL VLSNAYVYAQ 420
  421 GGKEAEMSSQ IESLQAVLSS IPEELFHEIE LEVHNAEGAA TNKQRLEVIK EQQELIEEEN 480
  481 SENEEKGVAA PKDIEDIDEK EDVKFEASQS GEAAEAIREG EQAEQQSKDT AATDKKNTSA 540
  541 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle