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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114196601, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.58
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASTPNEKGL QGDHLPQDSQ NSQYSHQDHS TSTSITRTSS SDDTLMQPAH PHAPFDPAEA  60
   61 EYLTQLASCD QQLSRIASRA IAPGDPALDP DSKEFDLYQW LRRVVHQLKD EGIPRSKASI 120
  121 YFRDLRVTGT GAALQLQQTV GGLFTSLLRP RETFNLGPKT PKQILKQFDG VLDSGELLIV 180
  181 LGRPGSGCST FLKTLCGELH GLQVDSKSDI HYSGIPQRTM QKQFKGEMVY NQEVDKHFPH 240
  241 LTVGQTLEFA ASVRTPSART QGLSREEYSK LMTKVVMAVF GLTHTYNTKV GSDTVRGVSG 300
  301 GEREAPLKFV QSLRLAADLD NSAHAVAIYQ ASQAIYDLFD KAVVLYEGRQ IYYGPASAAK 360
  361 AFFERQGWYC PPRQTTGDFL TSVTNPIERQ PRAGMENQVP RTPDEFEAYW HNSPEYRELQ 420
  421 QAMAKHHDET IAQSEEKLRE FQQQKRQAQA DHTRPASPYL LSVPMQIKLN TKRAYQRVWN 480
  481 ERTSTITSFV GNCITALIVG SVFYGTPAAT SGFYQKGGVL FYAVLLNALT AMTEINSLYS 540
  541 QRPIVEKHNS YAFYHPSTEA IAGILSDIPV KFLLAVAFNL ILYFLSNLRR EPSQFFIYFL 600
  601 INFVIMFVMS AVFRTMAAIT KTVSQAMTLA GILILALVIY TGFVVPVPNM HPWFGWIHYI 660
  661 NPIYYAFEIL VANEFHGRDF DCSQIIPAYP NLQGDTFVCS SKGAVAGRDK VSGDAYIWAS 720
  721 YEYTYDHVWR NFGILIAFLI GFLAIYFVAT ELNSSTTSTA EVLVFRRGHE PPALKNGGAD 780
  781 DEESSSTDAP VPASSDEKAQ SELPPLPPQR DIFTWRDVSY DIEIKGEPRR LLDNVSGWVK 840
  841 PGTLTALMGV SGAGKTTLLD VLAHRTTMGV ITGDMFVNGK PLDSSFQRKT GYVQQQDLHL 900
  901 ETSTVRESLR FSAMLRQSDA VSKEEKYAYV EEVIRMLNME DFAEAVVGVP GEGLNVEQRK 960
  961 LLTIGVELAA KPKLLLFLDE PTSGLDSQSS WAICNFLRKL ADSGQAILCT IHQPSAILFE1020
 1021 QFDQLLFLAR GGKTVYFGPI GKNSRTLLDY FEGYGARSCA DDENPAEYML EVVNAGTNPE1080
 1081 GKTWSDLWNA SPEAAEVQHE INRIHESKKG QPEHDPNEIP DPREHAEFAM PIMKQLPTVF1140
 1141 RRVFQHYWRT PNYVVAKMML GLCSGLFIGF SFFLPDHSQQ GMQNQIFSLF MVCAIFSSLV1200
 1201 QQIIPLFLTQ RALYEVRERP SKTYSWSAFM MSSILVEIPY QIVMAVIVFA CYYYPVSGVQ1260
 1261 SSSRQGLALL YFIQFFVYAS TFADLVIAAL PDAETAGAIV TLLFSMALTF NGVMQTPEAL1320
 1321 PGFWIFMYRV SPFTYWVGGV AATQMHGRPI QCSDVELSIF NPPSGLTCGD YMAKYMSVAP1380
 1381 GYLQNPNATQ DCSYCSLNTA DQYLESVHMP WDQRWRNFGI FWAYIVFDIA AAVALYYCFR1440
 1441 VKKWNFSFGK KKSA

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