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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ATG15_ASPTN
Protein type: Globular with Signal Peptide
Type Confidence: 0.97
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSHQGHQKK RRMREMGFST LLLGASLLLP VSVSASAPPS IYSRPYDSSP FLSPQIPLED  60
   61 LSSLSGTHEF TLRHIFHRGT YQHPDLHRRL DIQPHTQLWV LSEDGTDKEA AEFDTPLIAS 120
  121 SHPVTIQRLA DRRPSVIEEH LLAARMSGSA SVLSESDWVM DTLAGPDVTD KNSVLTFAKM 180
  181 TANDYIQEPD TEDWQDIHGR FNYSSSFGWQ TDGLRGHIYA DKTNSTIVIS LKGTSPALFD 240
  241 GAGTTTNDKL NDNLYFSCCC GQGGSYLWRQ VCDCQKSAFT ANLTCIIEAM NDENRYYRAA 300
  301 LDLYSNVTEL YPDANVWLTG HSLGGAMTSL LGLTYGLPAV TFEAVPEALP AARLGLPSPP 360
  361 GHDPRLPQSR RYTGAYHFGH TADPVYMGTC NGVSSVCTWG GYAMESACHT GQMCVYDTVD 420
  421 DKGWRVAIGT HRIKAVISDV LEVYDDVPQC APEEECYDCE LWKFFRSNGS EHTTTTTTTT 480
  481 TTTTTPPSTS TSTCKTPGWW GCLDESTTTT ATSTSTTSTS TTTCKTPGWF GCKDPTTSTT 540
  541 ATPEPSLTTT LPLMTSTTCA HPGWFGCRDP TSPTSTPTQT PPPGDTTSCE SPGFFWGCWD 600
  601 PKTTSDHPIT TPP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle