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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|115384554, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.59
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPTISSSLAH GSPPSSQSLC HHQPPLSSQS STTISAPVST SPVDSRPRAS SSASCLPAVA  60
   61 SPSATASSAN PPLTGTPGLT GSVIGSISRR NRRSFAALAR EKTTSALANL SAIGASGTGT 120
  121 LRPSASSGSL SKHTRKPSQI SVGESAGTSP LTPPLSDGSA PSESSSPAPI DPNTASPPVA 180
  181 DSVDKRRQTL QHVPTLAPVE PPATMHQTSS RLLRMTEDDR PFTKDFMDLF STLMVSLKLD 240
  241 SHRVRFTKYD HSFTSEEAIN NLGSLKFSQS NRMPDPKDPS RIVTTTTTTT FSMAKEMARS 300
  301 VCQRFVDARF IESVDGKGAQ QFPLKGALYQ LTPKGINILQ RFCQRNGITA RHVIDVLESP 360
  361 RNTMQLVNLE RDTETDKLSH DRATIEVIFR RFAGQDGPNV KNSISTSDSD SLSDYSNGLV 420
  421 GVKMARERKV NDKIVANTFT GKAAVDWLMD CSTTIERRET VLIAELFVKY GLITMLQEDK 480
  481 LMPMPDNSIV AFQPSKNAIY GITERGQRVC GWIARDKSRD TPPMYDSRGI PRDSNNARLN 540
  541 HILQDPALRL LFREFLRFSL CEENLSFYLD VSEFTATYHK AERLGTFKKP DAVRETLAAA 600
  601 YGLYNAFLAP GSPCELNIDH ALRNSLASRM TKAVGDDESM FRSLQEVVHL FEMAQTSVFK 660
  661 LMSSDSVPKF LRDPKYAIVL QEHDVDLAAA SRSYSPTPAP APVPERSMSR SART

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle