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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114196262, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.63
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMDFQKSSPY PMYYPRHPPR STGVAPVAPP DPQIAPPPLP TTSYATVTTA ITTPPTSTAP  60
   61 TAPTAAQETY ILQTTAFPPR DEIPRSTMVY RYPPPPSPAV TIASTPYPPE KAYASARTEH 120
  121 HQRYHVTPTS RGSTKQPPER AYPAHPSSEG WREAALRLLS SSLLSFFFSV ASFCSLYHFC 180
  181 FCFPPVTPHE PPSLPRPRAS EVFGQQRQFR VSWTNPVIIS MILPAIYSSA LLVLPVAALL 240
  241 YLYLHLHLHL PPSSFLQANP GFSRPCQPPT NPPAHHRPGS SMSISSMLGA SDLDRPARDV 300
  301 GSSALFSRLP VSSAPFGSVP PPAAAPGAMS PPMAPARPSA LDYSPFRRSQ TPDKSFSKPP 360
  361 PGKPYRSNSG GMTSSTSDSS KFGGLSRGPP SSQYPDKPSS AHPSPQVSSV EPYNEPRRLS 420
  421 FGAPARPSSQ PQHLDAPGRP GYSSLTRPSA SAGEGPFGQR SASFMGHESH GRFSGLYADR 480
  481 HMEEQAHRER ERALAQENEA KSHGPSRYPS HFPERETSSR PQSTWELGRS QPSSPEAKRY 540
  541 SAAESGGGFG FGAIQSYTKS LDAKRSGRAS PLPQAVQGAL GPTGEGGLKN DLGRVFSGIG 600
  601 SGVGGVTASS GSGPSTPMAA SPFKRDSVTA RSANSETTDE TKAARPGSAT GKRQRRSRDE 660
  661 EAAEVEADLR AGAAARGVRR NRHLHHHHHH HHHHRPKPED DPFSAHRGPS SSVFPRTSTP 720
  721 AEGAPAPHAH HHHHHHHHHH HHHARPSAPS AVVPMREPRT VVTIEPTLAS VAHLPRHHLG 780
  781 STLYNPIIGI PTEKASLESA KFGYTTTPRP LPRFEGKANC TFTVRVPRFR IDASHREEIC 840
  841 ARRALWGTGI YTDDSDPVAA AVHSGFIRGA WGEDVDVEML DLEIKDAYQH CPKTAQEMGL 900
  901 PEGDRPKEPP VPPTDKDLHI TLLVLPPLER YDSTVLFGLK SRSWEKSHDG MSFKVLRVEW 960
  961 VEEGVGRGEE RSGEARRKRL RNLMQSGRIC TGPGVVKLEH LRNGISVPRR TPKAMNGESS1020
 1021 AMQTVS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle