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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|115383930, gi...
Protein type: Transmembrane
Type Confidence: 0.65
Topology Confidence: 0.32
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSTAETTPL LPQHQQRSQS SNTSPRATRP PRTVTFNPLA TVSTYHDPTS ADPTFGSSRS  60
   61 TQSTASSFPA GQGGQQRPSG LSALNSKLRR RNSHGAPYST AIASTTTTPK IGPQRTTKTA 120
  121 QKLKLLPDPV TAEEALEGDF PSDVYSQITR IKEPTARSHA ARLGKADRDR LPRVTAYCTA 180
  181 NSYRLDGVIR FLKARSKTRG ANPKLYDECV YSPYDYQYED KQNGRSVSEN HMSTGNSNPS 240
  241 ERISPERRFS DSVVEIEDNT KSRREDLIDL HVSSEQSSNF SHRPESAIST SESQTPDFDT 300
  301 TIHTPEVFLF DYGTVVIWGM SPAQESRFLS DISKFAASIL SPEDTQVENF NFYYAREYQA 360
  361 RIYNDFISLR DPRNHMIKLA ISHALAQSVK TSLFEDLVSE TITNTAPLPA QIAQTGSVNL 420
  421 TRRQINMQIG ELFILRINIH LQGSVLDSPE LMWAEPQLEP VYQAVRSYLE MDQRVSLLTE 480
  481 RLDVIADLLA VLKDQLTHRH GEYLEWIVIV LIAAEILVAA INIVVDLYAG VD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle