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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|115388485, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.67
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPGDLKTKVG HGLAKGLGIK LPYRDPLGAQ ADPVTRGESM FSVGTIDTYS YVEPEPTSAE  60
   61 WLKEVTPSRR EIAQYFIRLF PFLSWITRYN TQWLIGDLVA GITVGCVVVP QGMAYAKLAE 120
  121 LPVQFGLYSS FMGVLIYWFF ATSKDITIGP VAVMSTLVGE VVLEAKKIDP DVPGHVIASC 180
  181 LSIIAGAIVC FMGLIRIGFI VDFIPLPAIS AFMTGSAINI CAGQVKDLLG EKADFSTRGA 240
  241 TYMTIINTLK HLPSSTIDAA MGVTALAMLY IIRSACNYGA KKYPHRAKIW FFASTLRTVF 300
  301 VILFYTMISA AVNLHRRDDP MFKLLGTVPR GFQNAAVPVV NARIIKTFAS QLPASVIVLL 360
  361 IEHIAISKSF GRVNNYTIDP SQELVAIGVT NLLGPFLGAY PATGSFSRTA IKSKAGVRTP 420
  421 LAGVITAAVV LLAIYALPAV FFYIPKASLS GVIIHAVGDL ITPPNTVYQF WRVSPLDAII 480
  481 FFIGVIVTVF TTIEIGIYCT VSVSAAVLLF RVAKARGQFL GRVTIHSVIG DHLVQGDGKY 540
  541 GSGNGADHPS GDAGTTHRSI FLPINHTDGS NPEVEVEQPY PGIFIYRFSE GFNYPNANHY 600
  601 TDYLVDTIFK KTRRTNPFTY GSPGDRPWNN PGPRKGKSEP DESHLPVLKA VILDFSSVNN 660
  661 VDVTSVQNLI DVRNQLDMYA SPRSVQWHFA HINNRWTKRA LAAAGFGFPT PSSEDGFHRW 720
  721 KPIFSVAEIE GKASAAAHAE MVNNEHVQHK AHHDDIETGL KQDPELTERE THGIESSDGG 780
  781 STQEDKLQRD LKDSQAYRDR RKVAMVQGIN RPFFHIDLTS ALQSALANAG EPDPTLDALD 840
  841 A

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle