YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|114195721, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.70
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTNPSQLFLL ADHIKLSLLE RQRAISLNLE PNSQDGEISR SLESLRDGIA KVEADCAGRA  60
   61 ATNNDDTTDL RDQLGHLQSQ YQELSAQFHR PESSANNDDP TRASPEFPNV QQGSAPDLKQ 120
  121 PVPQHPSSKS VRFMDAAAAE DDELNRRNLF QPYRDSPSPQ GADTSAMSNE QIYSHHDQVL 180
  181 RDQDEQLDRL GESIGRQHQL SIQIGDELDG HVALLDDLDG HVERHQTRLD GARRRLDKFR 240
  241 RSASENWSMM TIIGLIITLV ILIVLLK

Type	Start	End	Confidence
Cytoplasmic	1	242	0.70
Transmembrane Helix	243	266	0.87
Non-Cytoplasmic	267	267	0.70