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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|115387241, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.86
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSPLWRRNDG SDGQPPSDQG QQSHEDRRST STRHQDEPDE RTRLLPRENP GYLSPDDPAV  60
   61 SPYNLWSIRA LRGLSSLCLA ISFIWWTFLL VSVFVSPPTM HTRGSGFFCF AYTTLTVAYL 120
  121 VISLLFFSVP SRPMVVSGIL LLVLLLVDMC IIVSVPRLRL EEGWVGIASV VWATLIALYN 180
  181 VLQIRSVAWG KREEEERLTG REETRRPLRE WLAVLFESVA MAILAIVAIL FTATLVLRAR 240
  241 DASLRPPGSR YYVNGDSFQV HLACVGDPKD TNNKNNTTPT VLLEAGENPA EHTLQPFIDD 300
  301 VYRSGAIPRY CYWDRPGFGW SDNAPSPYSA GMAADALSEA LALAGEEGPW VLVSAGVGSI 360
  361 YSRIFASRHV LEIDGIMLID SLHEDYLGKI ASPGRGFLLW LRGVISPLGF DRVAGAIFKG 420
  421 RTREDRVYGR SAYQTGKVIK AKLQENLVAA TMTASEIQTA RHVQEADTPL MVVSSGVEVR 480
  481 KSQRWAKAQQ DLTKVTRNLQ EWDVVKGAPH EVWRTVDGRQ LLEKRLRQLV KGE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle