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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|115389656, gi...
Protein type: Transmembrane
Type Confidence: 0.80
Topology Confidence: 0.57
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTVSTLPYMK TNPKIIFFTD FDGTITLQDS NDFLHSSLPS ARYVLTDRLF LHHSDAFRDM  60
   61 LDSVKTPYNE CIDQLRKNMR LDPHFVEFYN WSKENNVPIV VLSSGMIPII RALFESLLGN 120
  121 TPDDHLHIVA NDVESRGGKD INTEGGWQIK YHDDSHFGHD KSLEIKPYAA LPDGVRPTLL 180
  181 YAGDGVSDLS AAAETDLLFA KKGNDLVTFC ERKGMPFTVF ENWSSILATT KDILSGKVTA 240
  241 KQVRAGVQLA LVAFFILILV VTLDNRFRVL PASIHGHLPS HYSGFAITDV TVVTCSSINP 300
  301 FSNCKPRSES WTVVEKDLYL RTGWTSSAFI HFEHKKEEEL SSSDKVVIDL KISRLVPEST 360
  361 DESKKDGGVW EERPGGIWLK RTAKRHASDS QKAITAIDVL FGADAVDPRA GWEVKDTPLL 420
  421 LDSRTENTEA RISVRRGHPT KNKKPVPRIN ENGRFKIMQL ADLHLSTGLG ACRDPVPIEP 480
  481 VPGQKCEADP RTLEFVERLL DEEQPDMVVL TGDQVNGETS RDAQSAIFKS VKLLVDRKIP 540
  541 YAAIFGNHDD EGNLSREQSM QILEDLPYSL SSAGPEEVDG VGNYIVEVLG RGTTGNSALT 600
  601 LYLLDTHSYS PDERQFRGYD WIKPSQIRWF KTTAQSLKTK HHEYTYMHMN MAFIHIPLPE 660
  661 YRDPQNYYRG NWSEAPTAPG FNSGFKDALE EEGILFVSAG HDHVNDYCML NKDQNEKPSL 720
  721 WMCYGGGAGF GGYGGYGGYI RRIRFFDFDM NSGRVVTYKR LEFGETEAKI DEMMIVDGGA 780
  781 VKGPQENS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle