YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114194703, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.31
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGVLRPRSQS DAHRAGLSLR RASLVDDLAP GPHDYPVEQA NNGSPPRTLG IEPLVSGGTS  60
   61 YRTPSRSFYH RSFNNTLGEN MRTCWPRIYL MLRVDRVLTP VGALDPAHYS SNGLREQSAE 120
  121 LASFALSLNG SSPQERNTLL PSLDIFHQPE NMNLASSPAE TIVPARRDSE YHQTPAAGSS 180
  181 VLTEMIRNPD EFQDLPTPHG ASTTDGNGTS RPRASSTSPT ADEVAEDNET TEHTSLILRT 240
  241 SPSKPIYSYG SVEDVESQRS TRNPEGGVLR ETLANVSSCC RVLSNPKSWS GRAVWNRGVV 300
  301 YPVSLLPAVF LGLLLNILDA LSYGMILFPL GEPIFSDLGS DGISMFYVST IIAQLVFSCG 360
  361 GSIFRGGIGS EMIEVVPFFH QMAFTILARV GDNNPKSVLA TCILAFSVSS VLTGLVFFLM 420
  421 GTCGLGSLIG FFPRHILIGC IGGVGFFLLE TGLEVSARLP GSLELTIPTL KKLFQLDTFP 480
  481 LWITPLVLAI GLLVLKRFVR SNFLVGGYFI AVAVVFYIVK FAARIPMDTL RNSGWVFDAP 540
  541 SSANPWWHFY TLYDFSAVDW AAFADTIPAM FALTFFGILH VPINVPALGI STGEDNLNVD 600
  601 RELVAHGVTN ALSGFVGSIQ NYLVYTNSLL FIDSGGNSRL AGIMLAAATG GILLVGPVIV 660
  661 GFIPVMVVGA LIFLLGIELM QEALVDTWGR LHRVEYLTIV IIVVTMGAWD FVVGIFVGII 720
  721 LACLSFVVQT SRKSAIRAKY SGKVASSTVR RPPIQQRFLK EAGQQTLIIK LGGYLFFGTI 780
  781 VDVENTMRGL IEEEAFNRRP IRFLILDFSR VYGLDFSAAE AFTRINRVLR KRHVQMTISG 840
  841 LDVEGEIGRS LQNVGLFESE NGVQLFEDLN SALEFCENNY LKVFYSYREA LLKRTNVSPT 900
  901 FLEVPVSQTQ HHLGEGIVSS PRHRYLQQAA TTTLHEDETA VVAPAAWSAM RQPLPLLLQT 960
  961 FQGLTARNED FWFPACAYFV KETYAAGTVL FQEGDVPAGF YLLESGMLRA EYELPQGSYF1020
 1021 ELIVAGRPCG ELPFFSETRR TATVKAEQDC VAWCLNVEKW RALKEQEPEI ARELLTVSLK1080
 1081 LTTERMDCIT SYVLTMAA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle