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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114194609, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.68
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAFAGLSGA QAILLATHLC ASGNVSSLPQ LQARFPRWLP LERVFRIILT YLPESTEPRK  60
   61 YTSVLQELLE GSHTETHDVD VSAVKGLSDE AARTRVRKLR LLPLKYPDDE DTLGSTDLLT 120
  121 QFLIHRAHRI DSETALQPLI LDLLLPFYQH SATLRTWLIS SLLPLLRLNY EYYPSQDETF 180
  181 SLDILESMDD NTAINVLLSM TSSQKNDMDL ARNLRGLLGP WMFGSNRPKR RRLNQTAQQT 240
  241 SITLSQDESS TEKGTSAGWQ SVNEWLLSRS LIDHESTVNA YVHWDGPEDV DLGGYNEEKE 300
  301 TMSSEESIRL RTRYGQSGLA VVYANSDTSQ RCLDGSFQII SRVARILGLE ESLLGSQDNS 360
  361 GLPVVTFDVT RVSSSSRVSL LQNALLSVSN PLTTPSTSSI TFLNAILISL RVLIELGHPV 420
  421 PCRTIANICL HSNDEAQMLE LRAVIESVVK QTKTRDWRKS RQQLLWLWNW QGGESQPTES 480
  481 PAVCHGLFWR VPRNIVEAEI LKALLEVREY DLAVDIYVTT GSALSSDQVE EAIKEAIFTA 540
  541 YDNASNGNRT RGGMKRASDI LQAFRVHFPD SVSFKQIHAL IAATHSLSFY SLTLQHGVPF 600
  601 QPVSIRVHPD PLALIEKVLD QNPKAYTKLD DLLGIGRNLV AAGFSPRQRD ENDEPDDIVV 660
  661 STEPQDPVIT AERRIMSLAI SSALSSDDFG TAYSYILTRL TPPSLISTSS PLTNPEVKDD 720
  721 ISWRAVYNAG RYRAPASSSP NLQSQISQLS QRMELLSLAL VLVPYPDPLP EILGAWRRCD 780
  781 EELNVLRARE SEEEEIWDAK GDRFSTVPGG FGPTDSEQDA FETKQRHARR ARAQQSRVDL 840
  841 EEAPMGLFEV ARGAAMALHK NAFPLRGAAS DAATASHEVG DGESAQERVR KRDVVSNMVT 900
  901 GGLASGIGWV LGAQPVNR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle