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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114194555, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.63
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARKLRAAAQ AAAQSLRNAP PAIPDGSDEE MAEAPPSRDP SVAPEDTGDA SEKDPDVEPP  60
   61 SEPAQEEEPD AAPTPVAAET HPPSRGDTPT RSVGRPAIPR KRRIGRPPKN RPPDWDAPDG 120
  121 SAPPQIHVST PVKRRRGRPA ASGGRWGRNR GPSHVTQVPI DKEGNMMDVI DDEVAVPGDP 180
  181 EGDTKVDKNG HLQGDREYRV RTFTILNRGD RLYMLSTEPA RCIGFRDSYL FFQKHKFLYK 240
  241 IIIDDDAKRD LIEREVIPHS YKGRAIGVVT ARSVFREFGA KIIVGGRKII DDYNVKAARE 300
  301 RGDVEGELAV PEDKLPPPGE PYNRNQYVAW HGASSVYHTQ TPAAPLPTGK AVDSKKRRVT 360
  361 VTGDNWMLEH AREASNYNAI LTNTRRANLE GTYDIHTNVM QYPKIMQPTH ARWERLPPPD 420
  421 PRVAAKLTKE MSSLTLTNGV DEDETAPEEP TAASVEDETQ NKAEDTPKES IFSTIPAALS 480
  481 RRFAISDIYY ETPPYSNMGV PGPDGDVHDL GTNGLISAAN ATHPEFVSPE ILEELPAECK 540
  541 EALVEAATRE WEWKSKWRSE ATDGARTTPL KSYAWFP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle