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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114194493, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.69
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPLFAKRLS CFYCGQRTVQ TQKGAVRKWR CPHCEAINYL DEKGEITDPP AAETNPDVYG  60
   61 PDASSPPFET ADFTGSGLFC AQCVRNQHLF TSALASYFPP TDDPNYAAYE REYPKFRQNL 120
  121 EERYPQVCVK CEPRVRDRIR QAGYEAKSDH LRRMMDRSKA GRAARQARNW NWRSLLVFAG 180
  181 AIGYWTSIAG QFSWNMWSAL DTEDALRDPD DAVKPFSRAS CVHQVLETRR VPASCSVDLA 240
  241 PYAGLALVAG ILSIWYNPKL RLKVEGRGGR FVGLGEYYKV QLIVMVVRCA FWGVMRDPSS 300
  301 SGLEPTLPPA LHIFMVFFTI LSVIISRRIV KYDTRPLVVW NEDTPVSTPI QKRYASPVQT 360
  361 TGQKQSLSTA FDPLPRPSPR FPLEKLASPR AAPQEQSIPT PPPEGEGGDM DWTPSVQHVQ 420
  421 REITPTVSVH RRDQKSVLDG PLPFYGSLPA APVPPSWNLR SRPVQRPKPI EQVVERNPFH 480
  481 RTPTQASNSW GRASGHSDVS FAPPKFFPMS DHVASTGLES LFDRTFTIKS PEDEEPNSYR 540
  541 SQQRPVDTHP RHSTGMQRFF IFQYLRLGLL IASIAAWALS QHGHLSLPGN YIEVASLGSA 600
  601 SLIAGFALLE TLKQPIAQWN GMEILVYLAE LVAAVHIGGN LPRVSFERQY FDRYGKLLLV 660
  661 FMAVQEALTL LNLYRFVSNA ASPQEQSHRP GPSNGDPGNT FRAGRDSRDL QSFTTQSSAP 720
  721 ALSFSSTAAG SSFTMQTPEP QYRTAFPTFD SGFNRDHSFS LSSLKDNESD VSDPLDRDSD 780
  781 TETTMTTATT ATNNTIHNIR YGRNPSDTFF SPKRSELGPG LGGLSLDDGP RRVTRSQSQR 840
  841 MHGSDGARRM PRVR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle