YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|115391353, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.68
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPSETSILS NFLLSPASLP TVISLQQFTD LFPKRLRSHP QIRVLYRELQ QVREQDMDLV  60
   61 NSNIDTEARQ GENQKAELRR SIMKTGIDGV SIHDQREMDV DVQLFGQPST AAGNDYHSVS 120
  121 SLLSAMESAC ASVESEIAEV DQNASTLLAE LNTTAGELSD LRYGKMQGPA GTTGEEVVKE 180
  181 AIRGLKNLED ACYREP

Type	Start	End	Confidence
Signal Peptide	1	24	0.66
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	196	0.97