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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|115391283, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.71
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPHPRGMGG SESPRNRRVG EHWSAQNPVP TIHRFLERME QDKEARKAHE EELDAQEKAR  60
   61 VTEKKDAKPE AIPHRPRKSK GKTRVVTDPT TGRDIEVEDQ DSDSMDAVKN AKLVVPNANL 120
  121 GKPTPVRTDP NQSFDEYREN QDITAPPDPI AEGTTSDVPI HGEVTNILFH PTPSVTYKPM 180
  181 FDALERRGIG LCIGIVFGIL FIGRLFGTSI WALFLLGFCI ASGATANLLP ESVEWMNTFL 240
  241 GVVWGLVNPE MLSPVADTIE DIMQASAPGV VENVRIAEID QGSNPLRILS LRSLPDDHDH 300
  301 VQQLKDNIRE ENERNKDPDE AAAIEEGGSH YNLEASFAYH AKPTGQSTSA KARNMHMQIV 360
  361 FYLGIRGLFG VPFPVFVELK EMVGTVRLRF QLMPEAPFMK DMTFSLVGIP HIRAGCMPMV 420
  421 KGGVNILNLP LISNFVNYAI ATACGLFAAP KSMTMDLSMI LKGDDIIKET QALGIMWVRI 480
  481 HRAVGLSKQD RRGSYGGGSD PYINLSFSKY GKPMYCTRVI CDDLNPVWEE TAALLVTPEL 540
  541 IKANESLSVE LWDSDRNTAD DIVGKIELPI REMIQHPCRM YPQVSKLQGL SEGTEMPGEL 600
  601 HWEVGFFGKP KLRAELRTDG KKKDLPENFK NVPEFQDEKG VISNEEEDAV VHTPPDPLWP 660
  661 SGILSVVVHQ IVNLQLANIK GSNGNRKGRE YEPAREYGEK SEETGSDLPT SYCKIILNDQ 720
  721 LIYRTRPKAV SSKPIFNAGT ERFVRDWRSA VVTITVRDQR YREHDPILGV VPLKLSDIFQ 780
  781 TSSQVTRWYP LDGGIGYGRI RVSLLFRHVE TKLPPNMLGW DVGTFEFASD KITVQDFNHK 840
  841 AKIKLRTGGS SGKISRHACT VHGNNTTFDL THSSVHGKVR LPVKHRYRSP VVMEFHTSGK 900
  901 HGVAAYAILW LQHMIDNEDM PIDIPLWSTK NGKRLTQNYI TEDNWQVKRE PGLEDLQIIG 960
  961 RVQFHARFTP GIDETHEQYV VDDHSRETFE TWEACIAEGV RSRSISLEVP EDVERMHEES1020
 1021 LVNGRDILKH ADPRERRQWI DRQGQDWSGA FGQDPAAFVD EQGEKIAEPG SDQPVHDPVN1080
 1081 PPAIQGDTTA RFQHQQHVRQ ESNSSASSHD STSTVDSEQQ EQRSSFTSSQ LDSPSSSQAG1140
 1141 PSERSTKRAN RRSDQRHQRG MMQWKPARNA VFARDEAKYA LRKVKNRFSG DLTGREPDLE1200
 1201 TETGN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle