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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PRM1_ASPTN
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.74
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLFSRPGRSI FPLLPPYGAH DPNGGRRIIP LNPDGITPYL GLRSRLSQVW LNRWTILLLL  60
   61 VLARVLIAVA GMQSDMGSAK REALSACTSV ESMGSAMVSM PHYLSQGVNE LTAAGVEKAV 120
  121 SALKTMLLLT ITGVEELILF FIKVMYQTYL CLFTMVVRGS VHLALGVVED AADFLNSTVK 180
  181 SIGQDIHKSV DSFESSLNSF IDDINGIASA LLGEIPKLDI SDKLDKLDSL SLPSSIDSTI 240
  241 DKVNNSIPTF DEVDKYVTNI LRTPFEEVKR LVNGSLSNYT FDRSALPVPA KEQLSFCDGS 300
  301 DGINSFFDKV AHITTTARTI FIAVLIIAAV LVCVPVGWQE IRRWRTMKER SQLVHKDAHD 360
  361 PMDVVYIVSR PYTAATGVKA ASRFSNSRRQ ILVRWVIAYA TSPPALFVLC LALAGLFSCL 420
  421 CQYILLKAVE RTVPELTSEV GQFAGKVVDK LQDTSAKWAA DANSAIADTN TDLNKNIFGW 480
  481 VNTSTTAVND TLDAFVEKTT GVLNDTFGDT VLSGPVQEVY DCLIGLKVEA VQKALTWVHD 540
  541 HAHIDFPLLP NDTFSRGAAD SISDGSSNPS DSFLADADDQ TSNKITEVVF RVTDKIEEGI 600
  601 RTETVISAVI LLVWVVNALI GVLRALSLFW SRERTRGEGG GGAPMPAAPA DSHGFVDVPL 660
  661 TAIPDVASHS QPAPRYEGPA PALAVSRDIP YGDEKLGSVG QKALHVDGIS DLRGSSYVEY 720
  721 GMEKR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle