YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|114193806, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGEAWLYLL AVLINAVNLF LQVFFTIMYS DLECDYINPI DLCNRLNAYI VPEAAVHAFL  60
   61 TLLFLINGYW LAIILNLPLL AFNAKKIYDN QHLLDATEIF RKLNVHKKES FIKLGFHLLM 120
  121 FFFYLYSMIV ALIRDESH

Type	Start	End	Confidence
Cytoplasmic	1	6	0.87
Transmembrane Helix	7	28	0.92
Non-Cytoplasmic	29	54	0.92
Transmembrane Helix	55	77	0.87
Cytoplasmic	78	110	0.91
Transmembrane Helix	111	133	0.89
Non-Cytoplasmic	134	138	0.91