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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: NTE1_ASPTN
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.69
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADDGGPFPL SSSLLHASSS TTILESSSSS LLATSSPAIA ATFSSFSGRP SSYLPPPPLP  60
   61 PPAPSTMVGW IGWVFSFVFQ VIPSILYWAI TFCTITLPTW LFTLFSMSLT FTMNFTTLLL 120
  121 IALAIVSTVS WFIRYRFLNM YSRLPPEPQR KEPQLDLFPD VQEGDSKPGL ANYLDEFLSA 180
  181 IKVFGYLERP VFHELTRTMQ TRKLIAGETL LLEEEKGFCL VVDGLVQIFV KSIRDGKSPA 240
  241 DHELNLAGDD STDEEGQNVD GRQGYQLLTE VKNGASMSSL FSILSLFTED IQLRTSESLS 300
  301 SSVSSVGPNL ARVPDSSPSS PRGLVHSPVP VREPSESGHN LPTNGEFLPT VPPLHLEESR 360
  361 GTPDHDHQPE SRTRPGKKRR KSVHPDIVAR AMVDTTIAII PASAFRRLTR VYPRATAHIV 420
  421 QVILTRLQRV TFATAHSYLG LTNEVLGIEK QMTKFTTYDL PNDMRGAALD RLKDKFIKER 480
  481 DRLGHEEVTK GIALHNPSAG RRRRSSSFLR KEAALQARMA TTPRRPTATG SQENMSFHDR 540
  541 DAAGVSPGDL LSTIQLSRFG PRYEHLAPKI YSPLAEKEQS PFRPPTMRGP ASPFHRKESL 600
  601 DEDALFRESI LDCIMKALGL TSSTRDILRK SSHNSGDASP KLLSYDSRRQ KAVFSNNAFG 660
  661 FIDPYEGSVD GETESMMSMS VTSAGGTSPI VNLREELRND IEIVYFPQGS VLVEQGERHP 720
  721 GLYYVIDGFL DVGMPACDKG DDLVGATRPA HGEEAFPTLK RTTTASSRTS SVAPGGSDSK 780
  781 RRRQSRKSLY LIKPGGIQGY VGSVASYRSY TDVLAKTDVY VGFLPRASLE RIAERYPIAL 840
  841 LTLAKRLTSL LPRLLLHIDF ALEWVQVNAG QVIYHQGDES DAIYLVLNGR LRSVLEGTDG 900
  901 KMNVVGEYGQ GESVGELEVM TESTRPATLH AIRDTELAKF PRSLFNSLAQ EHPGITIQVS 960
  961 KLIAQRMRDL VERPMTEKGA EHGAGSIKTA TSTVNLRTVS ILPVTAGVPV VEFGHRLLNA1020
 1021 LHQIGVTNGV TSLNQAAILN HLGRHAFTKM GKLKLSQYLA DLEEKYGMVL YIADTNVNSP1080
 1081 WTQTCITQAD CILLVGLAES TPSIGEYERF LLGMKTTSRK ELVLLHADRY CPPGLTRRWL1140
 1141 KNRVWINGGH HHIQMGFRLT AEPSHPQTKR FGTVLKERVQ VIQAEIQKYT SRRIHQTALY1200
 1201 SAQTPFKGDF HRLARRLCGR SVGLVLGGGG ARGIAQVGVI KALEEAGIPI DIIGGTSIGA1260
 1261 FNGALYARDA DVVPMYGRAK KFAGRMGSMW RFALDLTYPT VSYTTGHEFN RGIFKTFGDS1320
 1321 QIEDFWLEFY CNTTNISKSR PEYHSSGYVW RYVRASMTLA GLIPPICDEG SMLLDGGYID1380
 1381 NLTVPHMKGL GADVIFAVDV GSIDDNTPQG YGDSLSGFWA TINRWNPFSS VPNPPTLSEI1440
 1441 QARLAYVSSF ENLEQAKTTP GCLYMRPPID PYGTLDFGKF DEIYQVGYKY GKEYLEKLKN1500
 1501 EGTLPLREET EEKKKLQRTL APRRASI

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