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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114193530, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.45
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDEENARSDT ESTSDPLAAP LKRRLQSRHL QMIAIGGIIG PGLLVGSGNA LNKGGPAGIL  60
   61 ISFSLVGCIV YFVMQSLGEM ATAIPVSGSF TEYAQRFVDD SLAFGLGWAY WYLWVTVLAN 120
  121 EYNAISLVIG YWTDAVPQWG WILIFWFLFL TLSNLGVLAY GEMEFWLSLI KVLGLIAFFI 180
  181 LAICISTGGV GPQTIGFKYW HEPGAFADSI NGVARTFVIA GTLYAGTEMV GITAGESANP 240
  241 QKAVPTAIRQ VFWRILIFYV GTMFFIGILL PYNDSRLLGS SSDAASSPLT IALTDAGILP 300
  301 AAHLINALIV ISVISAGNGS LYVASRTLLF MARNGKAPRF VGRTNAAGVP WVALIVSNIF 360
  361 TCIVFLTLSS SAGRIYSALI TLSGVATFIV WAAICLAHIR FRQALVVQGD DPARLPYRAT 420
  421 LYPWGTYFAL GANVFLIFFQ GYTAFLNPFS VDDFVINYIL LPVFVMFVVG YKIWHKTKIV 480
  481 KLHEMDIWTG RRIRPDSLWF YILVKHCLGR SFLFSLDGRW TAIHALYRHH IPVTSQSRPE 540
  541 EQPTTDLFGP ESMDPQMCYD DVAWEQSDDV SDNWLLQFLH IEVKKTIAKF ILEHDSGDDP 600
  601 EFTILRKGSF NITLRMKYTY SATNIRFSQP GAILFSEEKV RNEVAVMRFI SDQTSIPLPF 660
  661 ILHSGTREDS PLKLSPFIMM SHIEHRTILL QLSRPEFPEI GSLGQVDDFT WEVTSRPFSM 720
  721 NMNELPFYKL ARGKKLSLPG YEHGSFKLWC DDFRPANVLL NEDMRIARVV DWEFTYAAPV 780
  781 EFSYAPPWWL LIERPEYWSK GIEDWTRVFD RRLKTFLNAM RHCEDMDVEH SQSLLSDQMQ 840
  841 RSWESGDFWV VSADVFKKEA W

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle