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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|115396520, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.82
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLSGPLVRI GPKWVLCGDP AEIRRIWGIK SGYYRSDWYK AVRLNSEVDN VLSVIDNKDH  60
   61 HRLRSHLMPG YGGKGIANEE QLVDQQITKL IALIEKRYIS SKEALRPCDL ARTMQYLTQD 120
  121 VITAVGFGKP AGYLEANSDM YGILETSEAL HRPVHMVTLL PTLRKILESR PLKPLQPKPH 180
  181 DGSGVGRFLG YIKDLVDERY DDLKANHTDI LQSFIKSGLN RPQVESEALV TVFGGTDTTS 240
  241 TALRNIIFYL STTPRAYRAL QSEIDGAVKT VTRPVIRDAE AKALPYLQAC IKEGLRIFPP 300
  301 SMGLMGKVCP RDDTICGIKV PANTQVAWSA LAIMRNRAIF GEDADIYEPQ RWIDAPVERR 360
  361 KEMDASYGLV FATGTRWECL GKRLAYIELG KTIFELFRRF DFAMVNPVEP FRYFVLTMSK 420
  421 TLEPAGVSSA SDSPSDTPGS TVDNDTPASS SAESPRLTTA TIALTMMSLC LSVLLSALDL 480
  481 TIVTPAIPAI VGTFKSAAAY IWVGSAYTLA YAAITPVWGS VSDIWGRKPI MLIAVAVFLV 540
  541 GSLVCALAPH MDALVAGRAI QGLGGSGMGI MVNIVVSDMF SLRDRGLYLA ITSLVWAVGS 600
  601 AIGPVLGGVF TTRLTWRWCF WINLPVGAVS FLVLLFFMRV PSPRTPIAAG LKVIDWTGSL 660
  661 LIVGGSLMVL LALDFGDVVY SWSSATVICL LVFGTAVMAL FVLNEWKIAK NPIIPVWLFT 720
  721 SPTKIAPYVV FACNSYVFIG QAYYLPLYAQ SVLAASALTS GLYLLPLIVS CSLAAAAAGI 780
  781 FMQQTGKYLP VMYIAQGFLV LGSGLLINLE FETSIAKLII FQILIGIGVG MNIEAPILAA 840
  841 QAATSVRDTA AVTATMGFVR SLSTAISVVV GGVVFQNEMN AKNEGLATQL GSNSTLAREF 900
  901 NGDLAAASVE EIGTLGLDAD QEALVRKTYF EALRMVWVMY VAFAGLATVL NLFVRAHKLR 960
  961 DENEGAVLGA DRARPQGNPA DGAAELEMRN ERSD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle