YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|114193140, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSAPRTSRSL ISLTWPLIPL PRTTTTTTTI RPLSQSHRLN QQSPAPQPLA PKPATPQTPT  60
   61 NAPKQPDPRA TRILSPTPSH PTTDNISKTG LADKPLELDS TPAEKIDWTR SFHGLSAEPF 120
  121 PAHVADILLA PTDPEEVEIK PDGILYLPEI KYRRILNRAF GPGGWGLVPR SESIVTPKTV 180
  181 TREYALVCNG RLVSVARGEQ DYFSPDGIPT ATEGCRSNAL VRCCKDLGIA SELWDPRWIR 240
  241 KFKAQYTREV FVEHVVNKRK SKIWVRKDDQ VSYPWKETK

Type	Start	End	Confidence
Signal Peptide	1	26	0.86
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	279	0.99