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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|115399552, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.77
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRPPSASES TLSRPLVTPA ASAQHDCSNG PDLPHPKPRR HHVWDQHHHP PEAPSPSRAE  60
   61 SPTAHQWAKP ASSFALKRAS TAPLEKFPRP HSPQLSERDS IFATHYLPSD PEATTTTTTP 120
  121 QLPPVEDVAE DDGPGALNLA SANDAAASSV PIPSTKVPPR PSIVDSFPME VDRRVPIPLR 180
  181 SPSLSSSTLP APDLSALPSR PDTHLQKPHE VLDRSAHLPA WESMQPLRKI SSDGAATGPS 240
  241 PVEEKRSVTS APLKDPALDR LPTVPTRETS GTWSERSSRE NTLDGPGERS SSRSRRGRVE 300
  301 SSIEANLTNA EPASHVRSRK SSHYLGLFKE NTTSPDRKRR EDRGRWYDET SEAHDSQPQQ 360
  361 MGQSDLYHAG EQTTSPTEAP FALEQTRLKR NSKSLSQLSL IDHPLFAPPS EAERSPKDEV 420
  421 TKSPRRVLPR SLLEEIRNFH LTPGGARGTS FSKSIPTQYA EGGRDYITAK EEPQFDHLSP 480
  481 SSGPDTGPRR GSAQFEDEED EQISSAVYFP HERVTVSDEV DQVQPFADDR PGAEPYQVSP 540
  541 TKSNLGLVSK RHSLVDEPEA HHVDISLRSK NDSRILHGDL QEIQAPQLEE LTEKSLNAIS 600
  601 ERSGEESTCG ESEYDSGISV QDEASSLTDE AEVTPTATPT QRHRTLRPRR THGSSGPLGA 660
  661 VELKPYRHQV GGHTTVFRFS RRAVCKQLNN RENEFYERIE RRHPDMLMFL PRYIGVLNVT 720
  721 FSKNSKKQKP IPEGAKGRAD SNKAGDSNKH QDATSLTVPL SHDATDQPRI FSQKQVTGII 780
  781 PKVILENNRH IIPADLFSRS QRPRTADGAM PARHRFSQSA GVIPRGKQST GSWDDKHAQA 840
  841 LTKPKVSWGA TTVNRQLQEQ VLREVFSPPA IHHHRRHARG HVNLPRTISD GIHRRANLSE 900
  901 DQTASSRRNA PTPPEPPRSA AIDIVKQSNE GPGLSSSAST ALDATHNRLE QIRSQGSPPR 960
  961 SSSLSRARQV RRRHSGSGLQ RRGSMTPGKG GGELMFFEDD GYGGDREDEI FAMEGDASMA1020
 1021 RSRDHSQHTA DSGVPKIATT GATDISGRSN GDSSKSPSRL QVKDDSGAQL PANPKEAQTR1080
 1081 KDERVQFFLL LEDLTAGMNK PCVLDLKMGT RQYGIEADEK KRKSQRRKCQ STTSQQLGVR1140
 1141 LCGMQTWNVK KQEYSFEDKY FGRDLKSGRE FQDALTRFLY DGVSYNSVAK KIPVILEKLA1200
 1201 KLENMIRRLK RYRLYASSLL ILYDGEQTSS ETSMPNDTHV ATKRGVLSRR ASEDGHNNED1260
 1261 VQLKIVDFAN CVTGEDEIPP TAPCPPQHPD DIDRGYLRGL RTLRMYFQRI LKEVSHDEYI1320
 1321 ERGEGEAIAM RSQASGHDDT SDRYWDEGVM ESDPGEVSF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle