YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|115398960, gi...
Protein type:	Transmembrane
Type Confidence:	0.93
Topology Confidence:	0.63
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVADALLYHP ALAHYLRFVA TTVGRDKLLR TLQYFSRFYA WYLYRTNRPQ SSIEPFNAIK  60
   61 KQFGTTRKIL RIGKFIEHLK AAALAADNKS PIDPVLRYLA VGRQLGYAGY LTLDTITVVD 120
  121 AIGVRKLASA KRLQEHAYRA WMSGLVCSAI AGVYTIWRLQ EKEKTIDRKE GEGVVEAKKL 180
  181 EKERAAARIQ LISDMCDLTV PLSALGVSAL DDGLVGIAGT VSSLIGVWSQ WRKTA

Type	Start	End	Confidence
Cytoplasmic	1	136	0.75
Transmembrane Helix	137	157	0.82
Non-Cytoplasmic	158	212	0.78
Transmembrane Helix	213	231	0.63
Cytoplasmic	232	235	0.68