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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114191799, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.68
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSYNRLGDPD PYGENDSRSP IMDPNHYHNR TPSPGRPLNG YQLEDNPYAP RQHLQMPNSS  60
   61 DILAEQPTYS VERLPNSYGH NEAYEDHHRP NYGYDYSVDP EAHHDAYYTQ PYQPTVTPQD 120
  121 DYDLGQYPEH QNPYTDDRVP ILQQPENPFG PDPYSDEFQD DPTLAHTPSP APIKRWKTVK 180
  181 EVQLFNGNLV LDCPIAPKLL SQVPHAEPPG RDEFTHMRYS AATCDPADFF EERFTLRQKL 240
  241 FAKPRHTELF IAITMYNEDD FLFARTLIGV FKNIEHMCSR TQSKTWGKDA WKKIVVCVIS 300
  301 DGRAKINPRT RAVLAALGVY QDGIAKQQVN GKDVTAHIYE YTTQVGLELK GTQVHVKQRS 360
  361 GVPVQMIFCL KEKNQKKINS HRWFFQAFGR VLDPNICVLL DAGTRPGRDS IYHLWKAFDV 420
  421 EPMCGGACGE IKVMLEHGKK LLNPLVAGQN FEYKLSNILD KPLESAFGFI TVLPGAFSAY 480
  481 RYVALQNDKN GQGPLERYFL GEKMHGANAG IFTANMYLAE DRILCFEIVS KRNCRWLLQY 540
  541 VKSSTGETDV PDRMAEFILQ RRRWLNGSFF AAVYAITHFY QIWRSDHSFM RKFMLLIEFI 600
  601 YQTIAMLFAW FNIGNFFLVF HILTTYLGDK DLLGTAGKVL GVVFEWLYLA TLVTCFVLAL 660
  661 GNRPGGSNKF YMTMVYFWIG IMIYLMFAAV FVTVRSIQKE VSQQDFTFAT LFTNKQFFSI 720
  721 IVSLGSTYVM WFIASFIFLD PWHMFTSGRL LTNQFLQYIL LTPTYINVLN IYAFCNTHDI 780
  781 TWGTKGDDKA EKLPSANLKP GGKVDVNIPQ DDGDLNAQYD AELSKFAHKP PKEVQVISEE 840
  841 ERQADYYKGF RSAVVLVWVF CNFALGAVVL SAAGLDRFDN SKDTESTSNE RATIYMAVVL 900
  901 WSVAGLSIFK FIGAMWYLVV RMFLGGH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle