YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|115400141, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.96
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASMLSTRAL RSTVACSACR SLAVPSAATA TATRSAMLLP RRGLSTSPDQ PPTDYADKPR  60
   61 WSYTPPRAKA PFSLRFNSKR REYPVNADPK VLDQFYVRML GADGDKVLSD EIKWLAVTHK 120
  121 SFDQGRRGFN DRLAFLGKRI VQLQASLALV QSPGGSAASS VDAFGRRPFE HPALDGLPNL 180
  181 SPSTKELLLS KAKLAELAQK YELQKVLRWS PRKPQNLASS GFELVLAHTM YAVVGAVSLE 240
  241 KGGHVANEVA RERILAPLGF KMTA

Type	Start	End	Confidence
Signal Peptide	1	30	0.98
N-region	1	21
H-region	22	27
C-region	28	30
Cleavage Site	30	31
Non-Cytoplasmic	31	264	0.99