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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|115400035, gi...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.97
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRFPSLFGPA TAGLSTLIHL AHGLSFTSVS QPDLDLGPLG QVALAGDFDA ATFYAYTEQA  60
   61 HTPSPENDTQ SLLTPLPNGI MTTLADSDAA IRAMCPFTKK DGSFAGIFIG GNFTRLGGVE 120
  121 SPGAALFNPN TTKVTALPGL TGSVSAVLCD QETNRVYVGG QFQYKNSTNA AVWVVDQGWS 180
  181 SLEFEGFNGA VTSILKNDDG HIIFGGAFDG IGNATSSDKT LQIVNLPSAN ISSDAISSKS 240
  241 GYADPRNILC QTSGADGEGK TWLLDDYSPG YWRADMRYEF YPTKLRLYNT HLEGRGTKSF 300
  301 LFRRLPDNGI MNLTYTDPDT GDDVYCDSSC PLSDSTDELY RDFKFVNTVG MSGFMLEVLG 360
  361 WYGAGAGLNG IQLYDNETVA YAINDFNEPT CAGIEEPSKS SNTGSWTTTD TDESQSEYLT 420
  421 ANVTDSTTTD TSVVFMPDVK RSGRYSILLW TPGCSQDGTC ESRGVVNVTA TVSSNSDPVE 480
  481 KRIYQTNLYE KFDVIYTGHV DASDESFRPR VTLTPVAGQG DITVVASRVQ FNLIHASGGL 540
  541 SGELNGLYDF NPNSNNTNTD LSSSAINNAG TKLDENASVE SLVSHDGVVY VAGNFSGSGI 600
  601 QNIMFLNEDG NATAMAQQGL NSKVASMAVL DSLLYVGGNF TDTSDSSNSN LKHVAAYSFN 660
  661 DKTWTALGGG VNGPVDRVFA LSLNVSADLN ETTIGVSGNF DQLLGFDDIP SSSVNGFAVW 720
  721 LPSRKNWLQN LNITQFGFSG HLSAVTRAEN ITILAGNLAS GGISVGSSVS LLHEDELGLT 780
  781 PLLPKSNTTG ATYTGVYDTS SGRNLTILGG RFTTTASNGS QIHNLAMVDG NEGTISGLGS 840
  841 GVDSNSTFLT FVVSGDTLYA GGNVTGHVGD SALGGFVVYD LENGTFAETQ PPRFTGETVT 900
  901 VKSIVTRPNS KEIYFAGQFD NAGALPCPGI CFYDSDEQQW SRPGAALSGH VLAIRWTSNN 960
  961 NMIAVGDLEI EGNKSVVATY TTKGQVWKSF DGASSSDIPG TVTAFTPAST DVSKFWLAGV1020
 1021 SDDGSSFLVN YDGSGFRFAD KIFGDGTDIR GLEILPISKD HENVDLLNVD QMLLVTGKLV1080
 1081 IPNFGHASAA LFNGTALTPF ILTSTSGGQH GRVSQLFYEN KNPYTREGDH HSNGIVVLVS1140
 1141 FCCALGCVFL IVIAGVIFNK IQRRRQGYVP GPQTDRSTNM QRLPPEYLFN TLKNRNPAAP1200
 1201 TI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle