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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114190928, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.77
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASVNFDPEA NEPGNDVREV SSNISKPTKR QRWATTRVAG AGGVRKRVSI MDRFHKRHES  60
   61 KSEKRRSNLP TAEHPDAQGD EETGNRRIYF NVPIPDSERD EDGHPKANYP RNKIRTAKYT 120
  121 PLTFVPMNIW FQFHNIANIY FLFIIILGFF PIFGVDTPAL NTVPLIVIVV VTAIKDAIED 180
  181 WRRTVLDNEL NNSPVYRLID WNNVNVSEET VSLWRRIKKA STRATIWTYR TGKNMVQKKN 240
  241 QNAEEPEEAD RRASFMTTVT PRTSMYSQRG DDVLDQDAIQ MTPVPSPTPD ARSDWPLPNG 300
  301 EQSQYLHPDK ARNSLIVPPS PTTPPRKGGS VVDKSKQTPG TARFKRDFWK NIKVGDFVRL 360
  361 YNGDPIPADV VVLSTSDPDG ACYVETKNLD GETNLKVRQA LHCGSQVRHA RDCEKAEFVI 420
  421 DSEAPHPNLY AYNGALRWDQ RDPDFPEAPR KEMVEPISIN NVLLRGCSLR NTEWALGVVL 480
  481 FTGEETKIML NSGVTPTKRP QLAKALNWNV IYNFIILFFM CLISGIVNGV AWGRKDKSLN 540
  541 FFDFGSYGST PAVTGIITFW VALILFQNLV PISLYISLEI VRTIQAIFIH SDVFMYYDKL 600
  601 EIACIPKSWN ISDDVGQIEY IFSDKTGTLT QNVMDFKKCT VNGVSYGEAF TEAQIGMVRR 660
  661 EGGDADGMAA RAREKIAADT ARMLKLLRGI HDNPYLHDDK LTFVAPDYVA DLDGQSGVAQ 720
  721 KKATEHFMLA LAVCHTVITE HTPGDPPQIE FKAQSPDEAA LVATARDCGF TLLGRSGDDL 780
  781 IVNVMGEERT YTVLNTLEFN SSRKRMSAII RMPDGTIRLF CKGADSIIYS RLAPGKQQEL 840
  841 RKKTAEHLEM FAREGLRTLC VADRKLSEEE YRAWSKEHDI AAAALTDREQ KLEQVASDIE 900
  901 QELMLIGGTA IEDRLQDGVP DTISLLADAG IKLWVLTGDK VETAINIGFS CNLLNNDMEL 960
  961 LVLNIPESQP QRASQELDQL LQRFGLTGSD EELLAAREDH TPPPATHAVV IDGDTLKLML1020
 1021 GDDLKQKFLL LCKRCKSVLC CRVSPAQKAA VVRMVKQGLN IMALSIGDGA NDVAMIQEAD1080
 1081 VGVGIIGEEG RQAAMSSDYA IGQFRFLQRL VLVHGRYSYR RMGETIANFF YKNLVWTFAL1140
 1141 FWYSIYNDFD GSYLFDYTYI VLVNVAFTSL PVILMGIFDQ DVDDKVSLAV PQLYMRGIER1200
 1201 KEWSELKFWL YMFDGLYQSL ICFFMPYLLY SPARFVDSNG LNINDRMRMG VLVATSAVIA1260
 1261 SNTYILLNQY RWDWLTVLIN VISTLLIFTW TGIYSSVEAS AQFYKAGAEV YGALSFWVVL1320
 1321 LLTVTICLLP RFTVKSIQKV FFPTDVDIIR EQVTQGKFKY LDQYEAFVPP KAAAATSGGF1380
 1381 SDESATSSDL GKPVNPKQDP FSDDQQIYAP SVAPTQHTHN PRSQNGSTGT NYASSLDQRP1440
 1441 QPQSVDYVRN SPERTRHSFD RVQPDYEMHH HDMTRVDSLG VQTPPSPHSP LKGPYDPPTH1500
 1501 PPTGNFI

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