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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|115386332, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.73
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASTPESAKM NDSRRSEESI RTSSPRSSAQ HDTRKPPVPK ALQSKTARGE TPQQSFMNGL  60
   61 EREFKVKHLS LLGVFGWLLL LHVAGIFFFT KGFLLTRMVL ENKSSCDVLP FDDAALQSGS 120
  121 RGGNDGCWHQ KTFDKAIVII VDALRYDFTV PFAPRADGEM AHLYHDNIPV LYETAVNTPQ 180
  181 NAFLLPFIAD PPTTTLQRLK GLTTGTLPTF VDAGSNFAGT AIDEDNLVAQ LRAAGKNLVH 240
  241 LGDDTWHALF PDYFDANLTR PFDSFNVWDL HTVDNGVNEH LFPLLHPENV TKWDVIFGHY 300
  301 LGVDHAGHRY GPNHPAMGAK LKEMDNVIRD LIAKVDEDTL LVIMGDHGMD SKGDHGGESN 360
  361 DEVDAALWMY SKKGVFGRTS PETVAPPKTA RERFVPQIDL VPTLSLLLGM PIPFNNLGAP 420
  421 IEEAFAGARG NDWKNLVAVN RLTSAQIKRY QHEYATIRGA DDGQEFQSLG LWKTAEDGWR 480
  481 MLQKSGKQNL AQDVYASYRQ YQRHTLEICR GLWAKFDVPS MLQGVGILFA AIVFLVFYAR 540
  541 GIRADRTELT ESLLHTVALG SGVGAATGGF LAVSSAVDLK FIESTALFAA VGSIVGGSFS 600
  601 IFRPANHLEL PLPKTVWGWL AIFFTVSQSI GFASNSYTIW EDEILLFFLT TFGVVSGVSS 660
  661 MRQKTTSDRV LGVYHSILFV ILGRVASFSR LCREEQMPFC RSTYYASATS STSAPWQLAI 720
  721 PFILTLILPG VVKSFYAGSK SYEGTATLWV GMGFRLGLFL TSLFWLLEGA DDGEWLPVSK 780
  781 EILKSTRVFL AQIVLALAFA AGTTAFIYSK PCVTIDVTQG SSEPDSKNKS PAASQQTGRA 840
  841 TVTILGFGNV YGTRFFLLVV NFCLGIILMQ KPMGQGAIGL LMWQILSLLE ILDTNALVMS 900
  901 NSAIGPVVLA LLGSFYFFKT GHQAVLSSIQ WETAFIPLSS VKYPWSPLLV ILNTFGAQIL 960
  961 TAIAVPLTVL WKRPLLLSEP SKSTGSRPEK PINPAIKILS DVVQAACTYM LYFATVNLAT1020
 1021 TMWAGHLRRH LMLYRIFSPR FMMGAVALGV VDTVLMLVAV LGVRYSTLSV GDIFGW

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle