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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|115386046, gi...
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.69
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSGSPSDPP RGGTAGLGSS PPSATSGKGT PQTSDEDASV ELKTMKPERG GVKGSIPLGE  60
   61 DIMQVARIGE VAAMQRLFDE KKFTATYTDE EGITPLHWAA INNQYAMCKF LLDCGADVNA 120
  121 KGGESVATPA MWAAQRCHYY IVHLLLQHGA DPLLTDVQGY NILHLATIDG NAFLLVLLLH 180
  181 QEIPVDVPDQ QGHTGLMWAA YKGYPACVDL FLRWGANPNA VDDGGLAPLH WALVKGSLPC 240
  241 VLKILEYGGD RFAKTSDGKT PAVVAGEMNT TRAWYRALDE CGYDFDGNAK VLPMGMGSWV 300
  301 RNKSVMSKFF FLWPFMMVFV AVWILSNMVI YAAIPITLVA LFGLQWVAQK IASKGPSEYR 360
  361 ILQKTPYLAG VFAGSLFWVG VRYVLHVMPA TYSTSPFLNF FFVLFYCLTT YFYIFAMIGD 420
  421 PGFVPKLGSR NQQRAVISDL FQEWKFDEEN FCVSCMVRKP LRSKHCKRCG RCVAKHDHHC 480
  481 PWIDNCVGAN NLRHFVLYIV CLEVGIILFI QLTFNYINVL PAPANPQCNV INDTLCGYVL 540
  541 RDTFTLVLDV WVVIQLVWVT MLCAVQLVQI SRNQTTYENM RGHSIDRGYP SSRAFASAMT 600
  601 AGTTSLDAAG LSASGQGPNP AVGRGGPHRH RKHGCLKQWS SLLGIDTFFA TARDGLRDGP 660
  661 GGAARPRNPW SRGVVTNCRD FWCDPAPVFG RREPGAAMLG GEVVNYTRMY EVPSRMHRGG 720
  721 AYHSLAGDEP V

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle