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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114190003, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.69
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSPIQIPIDA ITSRFGERFN SVRAQSFGSR FANLRPVSEF LDLKRLSKPA NFGEVQSRVN  60
   61 YNLSYFSSNY AVVFVMLSIY SLLTNPVLLF VIILVTGGLY GIGKLEGRDL DLGVARFNTS 120
  121 QLYTGLLIVA VPLGIWASPI STVLWLIGAT GVPPGARLGR QTRRRMAPWM EEGDSRIEEI 180
  181 ESEDEFWMRE GRAIATRMDL EGRFGWPRRM LDYGEVFDDT ESVDGTDYDL YEDADSTVAY 240
  241 AVQLAMKDKE DWLVEKALER IRRAQRLGQK NVRLSKRELE ALERKRSQTN GVRSHPAASP 300
  301 RGSSMNTPRK PPFTKGEVND GYMPRARASG YQTPPRSGSL RSPYATSSPR TPQQTPYSSP 360
  361 LARSPVSVKS PTLARPLPDE PHWVPPPYTM HSHMDPRGSP GHPSMAPYMT GYPSAAAYGE 420
  421 RRPTSARHSM RSRPTPSASE DEEEESEGDD SGDEVQMVDV VERRVPTGTP SRKTPSRQST 480
  481 HRGSRQRSNR PR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle