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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114189974, gi...
Protein type: Transmembrane
Type Confidence: 0.97
Topology Confidence: 0.52
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGNFGRRLY TNLWEAANPF FGRGIKTSRV HPFSEHISSG SFVHDFLFKQ NARKFSSQPT  60
   61 RRTQITRRFA SGGFIVIGAS PNSAAVETGT TCAISPEKIL THRSYAFDRY LFPGIPRNAF 120
  121 QRRFHTSTSH KDYHPNNEIS KDSIKSENDR RASNEAQKST EGKRVENEAT YSDLKQNTHE 180
  181 QYRVGGSNRH LMDRLPHMPH LHRPSKEELL AAASGFWSRL KVRFKWFSIR SVRPFNFDEI 240
  241 SALFSWVLLG HVVWVVLGTT TFFSLLIIAI NTVFAQETLA GWVGNYLTRS SGVQVVFESA 300
  301 IVPKWKDGVI TFKNVFVSRR PGQGTGHVSK GSSKTAAAVA AAAALHGQPS PEISEQRIIA 360
  361 EDEDTNYTQF DVSIETVNVT LSFTKWINGK GPLRDVEVKG IRGVVDRRYV HWSDDDLDPK 420
  421 SYRHEHHPGD FEIDSFKMHD VLVTVYQPDN FRPFSVSIFS CDLPQLRKQW LLYDFMSANM 480
  481 MSGSFDNSLF TIHPRQTHSF TGAQLDGGLE EDGKPSPWKK HSRIRIDGLN IDHLNRGVQG 540
  541 PFSWIHEGTV DIVADIMFPA ENDESLTKVM ADLYDRLEAT VTSNRYHEST SEHPAGSHEA 600
  601 TVGDEDRRFL VTDLRLQMNN VRAVVPLFTR DLSYINNALI RPIVAYINSR RTFIPVNCRL 660
  661 VKRVGDFDGS WTTFDSGLMD DLSAAVYDAF ARDVVDEQAR KRRFKKVGFW SLQLAAQAIF 720
  721 MGMAGNIA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle