YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|115400886, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.57
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWILPLLGYL GVIVGFSFLT LAIASGLYYL SELVEEHTVL ARRLLTRLIY GIISIQILLC  60
   61 LIDRFPLSLS LLSIISHLVY ASNLRRFPIV KLSDPLFILS CVLVGLNHWL WFRHFSRPLP 120
  121 LAPRGGGSWR QPYAVSVEDM PTFTEVASYF GLCVWLVPFA LFVSLSAGDN VLPTMGSEYA 180
  181 TGERVSSAGL GPAGLASDGK MKNKGMAKAL VDGVREFVRE NGELMGFWRG ERSKRF

Type	Start	End	Confidence
Non-Cytoplasmic	1	6	0.57
Transmembrane Helix	7	30	0.92
Cytoplasmic	31	43	0.53
Transmembrane Helix	44	62	0.77
Non-Cytoplasmic	63	64	0.35
Transmembrane Helix	65	81	0.58
Cytoplasmic	82	91	0.54
Transmembrane Helix	92	112	0.89
Non-Cytoplasmic	113	145	0.72
Transmembrane Helix	146	167	0.78
Cytoplasmic	168	236	0.75