YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|115433498, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.74
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPPRIQNQLV SNSLLPYLSS TSSTTLCSST RCSPSCRSTS RPFSSTSSTQ TKLRSDMFTW  60
   61 LNGEGAALKN HIPGQTNYLT QLRYRRSGED ETPERTGPSR PFPLNPSFVS EPILSEELRN 120
  121 EIYERVVRKK KSVRAVSVEL GIDMRRVGAV VRLVELEKRM RQQNKELALP YARAIHEMVP 180
  181 TTPLYEDPRD HRSNPHESIN DLPVHRLTDP QIFYPVSESR HFTRTDAGRV FSAAPAQEHA 240
  241 QVARDTADPD AAVSRITQQP GSAIETVGKG AEEQQVLQPA DVRIPHPHLV AHERHRLAHP 300
  301 FEGRETQKLY ERRLRSEEEA ERARKQAAKD RAEQQMQKVQ PADSRFEFRF KDVEVSRETV 360
  361 GADGRGAKAP GQRYGVPSYE RKKGQVKIPT RVEV

Type	Start	End	Confidence
Signal Peptide	1	27	0.73
N-region	1	18
H-region	19	24
C-region	25	27
Cleavage Site	27	28
Non-Cytoplasmic	28	394	0.99