YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|115433368, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVMRAVQIGL RVWEFVFTLL IMALVGNMID ESFAGNPAVV NYTMFAAAFS MFTLFYLFPS  60
   61 SMNIDWAGHP IIVIIVDLLN MLIFLTAGIA LAAKLEAHDC SNLDYTLNNS VTNGSVDPEK 120
  121 RCREAQASTA FLWFTWAGYT ASLVFSFLSA RRTGADLRSR VGPARGARPS MAQV

Type	Start	End	Confidence
Cytoplasmic	1	9	0.87
Transmembrane Helix	10	29	0.93
Non-Cytoplasmic	30	37	0.81
Transmembrane Helix	38	58	0.92
Cytoplasmic	59	70	0.71
Transmembrane Helix	71	93	0.88
Non-Cytoplasmic	94	132	0.91
Transmembrane Helix	133	150	0.91
Cytoplasmic	151	174	0.85