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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|115433338, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRALQPTALI ALCITGIHAQ LLGPVYPAPR DLSSKESHVS SSWRNVTATL DKILSSKLNA  60
   61 TAAQSTLLKD LTFSVGMFSV HDSEASTLQY HHTSPEVANS TAGVSKVDGD SIYGIASGTK 120
  121 AFTVLAGLLE LDPQDWNRPL TDIFPAFADY IHDKEHTDPA RNVQWDKITL SAIAAQIGGV 180
  181 PRGTIPFTPG DILLNYLVAQ STGTLTPKTD PATYGLPPVN ASDPSIIPPC ASDGHCTGDE 240
  241 FAEAMADEYP VFQPWASPAY ANNGFILLGQ AIANLTGKPL AQIYQESIFD PLGMSSSRAS 300
  301 PPPESDYPRY VIAGDPAASI ANDPGIAVSS GGLFSSTNDY AKFGVAVLNS TLLPEEQTRR 360
  361 WMKPVSHTAH LRYSVGAPWE IYRYTHASGA VTDIYTKSGD SGFYSSYIVL LPDFDAGFSV 420
  421 ISCSSKTSRS AGTALVADIV SEMVLPALMD EAAREAQRGF AGTYVSTQAG LNSSITLSVQ 480
  481 NAPSAAPGLA LTSWISNGTD VLPLLPSFGL SAKARFVPTI PLSVSVDRGS CVSDVQPARE 540
  541 MGIDGDIGHT VSVTYITPHH ARRLSPQHPS HHLLIIKSTM KYVQLGNTGL RVSRICVGCM 600
  601 SYGEPGKQFT WSLPAAEALP VLDHCYRQGL NFFDTANIYS NGDSEVILGR AIKEYNWRRE 660
  661 SLVIATKVFA PVARDGDNPM AMSEDARDNA GYVNQYGLSR KHIFESVEAS LRRLDLPYVD 720
  721 LLQIHRFDPH TPAKETMEAL HDVVKAGKVR YIGASSMFAH QLLEYQYTAR LHGWTEFVSM 780
  781 QNLYNAVYRE EEREMFPACA KFGMGSIPWS PVAMGFLARP WRAFADTARG DALGQGMMGH 840
  841 KFTETDRRIS ERVEEIAGKR GVSMATVALA WCLSKPFITA PIVGMSKIER VDEAIQAIDF 900
  901 ELSEKEIQSI DELYEPKGII GHK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle