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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|115433280, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.67
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVPGMGSDF QLFSPLQSSN RRNSQKESKA FPLSSSDDGE QDWNQWMRWD DNALLDLPKD  60
   61 LQKASFDFPF TSPNSSTCQQ SNGPPQSSNF SPDVSFDGNN ISLDSFLPDH SPGVLASAVS 120
  121 NAPLSATSGS PISLAAVNRK RKSGSDDDGS TATGTVQNSK KMPAKKRAHN VVEKRYRANL 180
  181 NEKIAELRDS VPSLRASKNT NGGLLDDEDE GVAPAKQLNK ASILSKATEY IRHLEIRNKR 240
  241 LEDENTALKN RLRQLDKAVD QNLTSAASVS SPSNYTVSTE SGASSSPSVF SNAEDVPSDH 300
  301 SPSSTHPPEG LMKVPDSWKR MRAAAASDNA FNQSYIQYPS NDSGASHAGG GGRRRSHYPN 360
  361 KYMLGALAGL MVLEGMGTEK KSESTAKGLF AFPLHLFKSL QYPPGPYWAA MTQNFWHSWH 420
  421 ARAILHFLIL AALVVGSAFV VFVYLFNSGP ARPFASAKSA CETTLSSSNF RRQAWLTSIQ 480
  481 RVGVPRHRFF HEWYVVTSRC FEYVLRCLLG WKLYSWATGI TEEDEKGRVK TWDIAIDAQL 540
  541 AGGDAEVSKS RLVLTIFAAG TLPRSPMRMM LKALHCRILL WRVGEPGSWS FNTSNDVARS 600
  601 LARYQWDLAR QINASLPKDH EDRLPRHLAA LLQLDSEDVM IDSVIQRAVN LTWNRPTQEG 660
  661 ADDDEALLDV VEEDPAIQSS LDALAAWWSS HLLQRALLKY FEASSGGPEA KKSRDIFKRK 720
  721 IKLALKVAPQ PSAAHTRALV MMAVFFEQNR VSNIGKVLAA LPKEKSERKK SQTLNFLDTS 780
  781 LPVSVREEIS IAVRCAMIAA IFTARTTGDT SLPASFTMQR AITWFNQLPL DPVELTLLGF 840
  841 ASIYHLLHVL ASDTGYLSSS DSSNPPSPVS RSLPSSTATS SDEAEEPTPA PLTPSMSPQS 900
  901 IPNLGRVASE LMYWARNAYN PAFYGFTSNL VKVVESECTS LCHSAGVDVT DYSCIQEEKR 960
  961 KAIRKKTEKP PKAAEQTRLP REKSQPPRSD AVD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle