YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|115402577, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.72
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSHKSNDALR VQPAPRSGRS PSRSPRPKNR KKAPATTSSY ASEGVQDNNI FNLPSSDYRA  60
   61 LALLTLIAAV VRLFRIYQPS SVVFDEVHFG GFATKYIKGR FFMDVHPPLA KLLITLAGWL 120
  121 AGFDGSFDFK EIGKDYLEPG VPYVAMRLLP AVMGVLTVPI MFLTLKAAGC RSSAAALGAG 180
  181 AVIFENGLVT QSRLILLDSP LVFFTSLTAL SFTCFTNQHE LGPAYAFRAP WWFWLAATGL 240
  241 SLGATLSVKW VGLFTVAWVG SLTVLQLWVL LGDSKTVTPR LWFKHFFARV FCLIIIPLGF 300
  301 YCGMFAIHFL CLVNPGEGDG FMSSEFQATL NSKAMQDVPA DVVFGSRVSI RHLNTQGGYL 360
  361 HSHPHMYPTG SKQQQVTLYP HKDDNNVFVM ENQTQPLGPY GEIAGPFAWD NITAEYVEDG 420
  421 AVIRLNHLTT GRRIHSHDER PPVTDVDWQF EVSAYGYEGF PGDANDMFRV EIVKSHSDGE 480
  481 EAKKRVRTIQ TKFRLVHVMT GCVLFSHKVK LPEWGWEQQE VTCAKGGTLP NSLWYVESNS 540
  541 HPMLPADAEK VNYRNPGFLG KFWELQKVMW TTNAGLTESH AWDSRPPSWP TLLRGINFWG 600
  601 RDHRQIYLLG NPFIWWSSTV AIGIYIIFKG IAILRWQRNC GDYRNVNFKR FDYEIGTTVL 660
  661 GWAFHYFPFF LMARQLFLHH YFPALYFAIL ALSQEFDFLA NRVKAFGLAS KPAIGKVLAS 720
  721 IFLAGGIFAF TLYSPLVYGN PWTQDACRSV KLLSSWDFDC NTFYTDLSQY VTEFSSLNAA 780
  781 VPTTQAQAPS SQAPPVAIPP QQQQQQQVKQ DQQQQAGQGK AEEARVTSQA QPQPPRAQAR 840
  841 VEYRDQNGNL LDEEVVSSLA AEGKVSFETR HETKTQLANG HLVDMVDGKV APPAPPHPDV 900
  901 EGQNPETLQK QEQVPVEGGP ASAAGDGSSV EEPSSPKAKP ASEGNEATEV 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle