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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|115437446, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.60
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYSAILRGAS SSIHRLTEVK ARIPFLKNVH VNFILLHYTY IISMTFLSSI IIYPGTELAY  60
   61 IDALFFSAGA ATQSGLNTVD FNLLHTYQQI VLYWVSMLTT PIFIHTILVF VRLYWFEKRF 120
  121 QHVARDARAL RQSRSRMRTI SQDKDSMSHG REEMGVGGRS IVVLRNTLRN QGTAQEPGSP 180
  181 KRSPPSDSGS ASSGAPGESA RTSGDEQDEE QDESPGTSLR MRFGSLRVPA QLSPEQHIAF 240
  241 LENQRRNTGA LRIPSPREYD RGGVPQVLDE GNAEVTRTGS RQSDEPRSPR DAEESDHVGP 300
  301 MVGPHITINE PDMIRTKTRN STFPRMDTRP TVRETKDPGD PSSPLTRIAT RRPTITGVFR 360
  361 SLTHERERTT LPYLSWNATV ARNSNFVDLT EEQRDELGGI EYRALKTLAV VLISYYVFFH 420
  421 LLGIICLVPW ILTTRWGSVV TEIGQGRPWW AIFTAASSFN DVGFSITPDS MMGFADAIFP 480
  481 LLLNGFLIVI GNTGFPCMLR LIIWALSKFT RKETPLWEEL KFLLDHPRRC FTLLFPRNAT 540
  541 WWLFAILVAL NGIDLIFFII LDLNNPTVTD FPVGIRILDG LYQATCTRTA GFSVVSLADL 600
  601 HPAVQVSYMI MMYISVFPIA ISLRRTNVYE EKSLGIYPGA DDDDDSENQT TPNYIGAHLR 660
  661 RQLGFDLWYV VLGLFIICIV EGGRLQRKDE YAFQIWSVLF EVISAYGTVG LSLGYPGVNA 720
  721 SFCSQFQVIS KLVIIAMQVR GRHRGLPYAL DRAILLPSEA LNQKEIVDAE RRMRRRASSL 780
  781 AQTSTFDYAN SQAREDGAST GLDRKDGPSQ GEPIMRRQST FRSQQSR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle