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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|115437406, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTARNFSTA LRRARIPKPR STGRPILTAR VPSLATTTTS TTPARSFSIT TPVNATKEIK  60
   61 YTTDAYPNVK RNPNFAEITE QDVTFFKELL GAQSAVVDGV TADAADDIAP FNSDWMRKYR 120
  121 GHTRLVLKPQ STEEVSKVLK YCNERKLAVV PQGGNTGLVG GSVPVFDEIV INTGRMNTIH 180
  181 SFDEASGVLV ADAGVILEVA DQYLAERGYL FPLDLGAKGS CHIGGNVATN AGGLRLLRYG 240
  241 SLHGTVLGVE AVLPDGTVVD ALSTLRKNNT GYDLKQLFIG AEGTIGIVTK VSILCPPRPK 300
  301 AVNVAYFGLE SYENVRRAFQ EAKGQLSEIL SAFELMDGRS QKLVHESTGN KYPLEGEYPF 360
  361 YCLVETSGSN ADHDMEKLEA FLEHIMGEGI VADGVLAQDE TQFQGIWRWR EGITEALSHL 420
  421 GGTYKYDVSI PLPELYQLVE DCKARLTQMG FVGDDDSFPV RAVVGYGHMG DSNLHLNIAV 480
  481 RQYNKEVEAA IEPWVYEWIQ QRQGSISAEH GLGLAKKEFI GYSQNETMVK LMKQLKNLYD 540
  541 PNGIMNPYKY I

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle