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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|115385855, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.55
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIRRALFPAA IPGRWTALRA VSTTRIHRAQ LTTASHASCL ETGHIELRHD EGLLFVNNIF  60
   61 PSKLQWILQG PLQGNRSYEE ALKRIDRPHL AASDPLRIIN RIFPKALDLK IQEVVPRFRE 120
  121 GGAFVRYARQ TGVSDSDVEA AIRENLAAHP IRPWFNPFQE VSVARVLGRP WIEDLYRIPS 180
  181 QRLKVEFHPA SADGAADILT TETLYSLFRS YGKLRDIEKQ PADSKVSPHY AFVEFTRPRY 240
  241 AVMAKNCMHG FTCSESQGGG KFGTRVKIKY ERKIKLSMIK DWILNHPRIV IPAIAALIAA 300
  301 ITVTVFDPIR TFFIKLKIKA TLQAEENTAL KWIRRQFDKA NIIGFGHRAP DPRGLTAIWE 360
  361 DRQGDISQLQ SWLTENAETF IVIQGPRGSG KRELVMNQAL APYKYKVVID CKQIQDARGD 420
  421 TAKIARAASQ VGYRPVFSWM NSISSFVDLA AQGMIGTKAG FSETLDAQLS NIWQNTATAL 480
  481 KQITLENRRK SDKDASLTDE EYLEAHPEQR PVVIIDNFLH NASEDNVVYE KITEWAAGLT 540
  541 TGNIAHVIFL TTDVSFAKPL SKALPNAVFR TISLGDCSLD VARRFVLSHL AGESKGEDQQ 600
  601 AEKRGDLAGL DSCIEILGGR VTDLEFMAHR IEAGETPEAA VNRIIEQSAS EILKMFILDG 660
  661 GASSTAWTHE QAWHLIKTLA KAKHGSIPYN QVLLSDLFKE NGEATLRALE QAELISIVST 720
  721 NGCPEAVKPG KPVYRTVFKR LTENKTLSSR LDLEILSQLI AKENKSIGKH EEELRLLGGL 780
  781 PKQPYELRWR IQWLLDKVYK SQNKIRQYES ESAVLQKLLR SLSLVGWLDP RHTVADSPLR 840
  841 YACWTKRSWS SSVAVKVSTS YTCDGQETLS QADTEARLFA DVHGFHDDID KVVALINQNP 900
  901 SQYGQFLKGI QKIKDSGRLD MNKDQLRLYN KQRRELIDRV MADVQVVVTL PFNVKEILRR 960
  961 NFNPQFVIFN EASFFRDPDL FHGLGQLRED VRVLLVGDHK QLSPPVFTPA GEAAWSKSAF1020
 1021 ERLIEKGYYQ TLLNISYRSY KDLYEPTSVA YYEGKVDTFR NQPSGDLNIT ANPLRVRLAD1080
 1081 KTCTLRGLSH FLHLPPCRAP SRRYAEARFR PKGVRHPARL SLCLLRETGQ TMRPKAKKYQ1140
 1141 RRQPPRLFWN VTPT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle