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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114187690, gi...
Protein type: Transmembrane
Type Confidence: 0.59
Topology Confidence: 0.54
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPDNASLTSQ TNHSSRSVFP KGPSFTLDDF SSRDFIVKEF IESLSDSATS HRRSGAPPGG  60
   61 GNQLFDPKPL IRTFEHAQRQ LEDLSGDLEI RENELSAAVR RAEAQHSQNI SSLGRKLKQT 120
  121 IESFQQLDTS LNGAGISASD VGANGNMAVE TGRRLEELDR QRRRALDAHF LLECWDNVSN 180
  181 RGDITLLENL RRSGTGEAKV RSAQIARQLL RISQRLDPKS WGDSNGKSNG YGDKVVDSDN 240
  241 SESTNEIKLN TREIIEKFSE TLEKDLLKQF DDFYRKANFE GMKDCATVLQ DFNGGASVIA 300
  301 LFVNQHQFFI DRSQLVTEEV GGDPETWEQL ANPDSEPSKV ESSLQSLVDE VKAVVQEESA 360
  361 IIRRAFPYYE QVLGKFLQRV FQQSIQQRLE MVLEKANGIS SLAFLRSLQS SRSYISALVD 420
  421 DLKAHGLTEA PDPISAQTAL VLDQQLEDLF VPYFVGSSYI EREKKTLEEF YTSLLFKFTT 480
  481 YHARRKKAAT TFMASLSKSG TELLSSSRDA YISRLESSEF SATQRKMLLQ VAGVTDASDL 540
  541 TRLSEIKLTE EDGLPSIAHA KRMLKWLAEG VGRGLELSVS SEVPKDMMTL LGLLLSMMGE 600
  601 GYIEVCLDAA LESATAQETG KVEPDFSYLP AVQNAIGIAN LMVMCIHTLL IPLAAGSLTV 660
  661 RREMEKRTNL TIMKIEEKVN GIEQKVIDAA LAWVNKLLSG QKKNDFRPKE GDTAAWLEKL 720
  721 QTPTCAAICA FLKRMHHNIV TSLPTSGSNL PQLLTEIALG TRNLLLEHFK RFAVNGPGGL 780
  781 MVTKDMTQYT DVLKSWDIDE QVKGPSGALD VLLEVGNLFV IGSEALRERV RGGAAGATSG 840
  841 RPGNSAGGSP GRGAGEAGLS VQDVRTYVSR REDSNTAAMQ NVLNTL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle