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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114187643, gi...
Protein type: Transmembrane
Type Confidence: 0.81
Topology Confidence: 0.58
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDAGTADDRW KELVQIVPQR TEVLRFFQFY RQLAYPFNPI LVDIDRFELD LCTYLNAYAA  60
   61 GVFEAHSRSE KWATDQSIAH ISLLLATLSA GAHFSDLDLP QRSNISHDLG NTLQNHGQSD 120
  121 AAWAQLGTTV RLAQTMGLHT ERSIAYLPLY IQSKAKALWL GIDVTTADRD AQETAFYVNM 180
  181 LNHVDEVYQR ALPHLTSRAN CKSMHEHLEH LALKMHLSLL IGVLTRPALK QPQTQDLSYG 240
  241 ILRERAKTSM IDASRAFLDF QALSVIPLRT WSMVHTALTS TLLLSTWEET RNDPESRDLQ 300
  301 QRVIELFSAV SSVGQPGDSA PEYGPWLSKR HIRALITLRN TVRYTLDQER EVGVFEENPT 360
  361 PSEIPLPAFD LPPGFPEAVD QVGASPVSYL DSIMNVPLFD FSQETSLPNN SSRHSETYTT 420
  421 TAAMLESIFP TVTTPTSGRT STPSSVVAAD HDRPVTSTQT RRRRIVVAMT GATGAILGIK 480
  481 VLLALRRLNI ETHLVMSKWA EATIKYETDY HPSNVKALAD HVHNINDMAA PISSGSFRAD 540
  541 GMIVVPCSMK TLAAIHSGFC DDLISRTADV MLKERRRLVL VARETPLSEI HLRNMLEVTR 600
  601 AGAIIFPPVP AFYIKAAGVD DLVDQSVGRM LDLFGLDTED FDRWNGWEK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle