YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|83751255, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.62
Topology Confidence:	0.51
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPENKAYIII NDKKIELPVR KGTIGPDVIE IASLYKETDT FTYDPGFTST ASCESKITYI  60
   61 DGDEGVLLYH GYSIDQLAEN GDFLETCYLL LYGELPNKQQ KIDFDRCIMQ HTMVHEQFAR 120
  121 FFHGFRRDSH PMAVMVACLG AMSAFYHDSI NITDPQQRMI ASIRLISKVP TLAAMAYKYS 180
  181 IGQPFVYPRN DLNYATNFLH MCFSVPCEEY KISPVIARAM DRIFTLHADH EQNASTSTVR 240
  241 LAGSSGANPF ACIAAGVACL WGPAHGGANE ACLKMLQEIG SVKKIPQFIA RAKDKNDPFR 300
  301 LMGFGHRVYK NYDPRAKIMQ KTCHEVLKEL NIQDNPLFDI AMELEHIALN DEYFINKKLY 360
  361 PNVDFYSGIT LKALGFPTEM FTVLFALARS VGWVAQWKEM IEDPEQKIGR PRQLYTGPTA 420
  421 REYISIDNRL

Type	Start	End	Confidence
Cytoplasmic	1	128	0.54
Transmembrane Helix	129	147	0.51
Non-Cytoplasmic	148	430	0.90