YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|113906025, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDNWGRKRQ ILALLSSGQF VSGEQLATEL GISRAAVNKH IDALETYGVA IYSVKGRGYK  60
   61 LANPISLIDA SRLVQSIDNR CFYFDEIAST NGFMLSHTTE LKNGDVCVAE YQSAGRGRRG 120
  121 RTWVSPYGHH LYFSLFWTFP QGMAQAMGLS LVVACTLVEV LKSFGVENIG VKWPNDIYLD 180
  181 NKKLAGILIE MSGQADSQCQ LIIGVGVNMA MSEEQGKGID QPWSDLSDLV DMPDKTALVI 240
  241 ELQKQLKRDI QLFEREGLAA FKARWQAADL FYGREIRLLM GEKSVEGICR GVDEQGAVLL 300
  301 ENVDGVQAFI GGEISLRAR

Type	Start	End	Confidence
Signal Peptide	1	23	0.92
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	319	0.96