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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|113906332, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTKQFHCVTV GNPNAGKSTL FNALTGANQQ VGNWSGVTVE KKTGHFTLNG ADVYLTDLPG  60
   61 IYDLLPAGNS CDCSLDEQIA QQYLAEQRVD GIINLVDATN IERHLYLTAQ LRELAIPMVV 120
  121 VLNKIDSAVK RGIKVDLKKM SKELGCPVIG VCSRDPADVE KVQAQVLDLL QGRVSEAPLM 180
  181 LHYDEQIEAG VQLLCSKDAQ LSRGRALAML GNGSGCGSCQ NAELQDEVNT CTQIISSQGH 240
  241 DIEVMVATTR FNFVEKVFQG SVKESGFLTL SDKLDKLVLH PMLGIPVFLF VMYLMFMFSI 300
  301 NIGSAFIDFF DVFAGALFVD HFGAFLTNMG SPAWLVTILA GGVGQGIQTV TTFIPVIAAL 360
  361 FLGLSVLESS GYMARAAFVV DGLMRRIGLP GKAFVPMIVG FGCSVPAIMA TRTLGSERER 420
  421 IVTGMMAPFM SCGARLPVYA LFAAAFFPDS GQNLVFLLYV IGIFAAIGTG LLLRSTLLPG 480
  481 TSSAVVMELP SYEMPKLKAV MVRTGKRTKS FILGAGKTIV LVVTLLNFIN AIGVDGTFGH 540
  541 EDSQASLLSV ASQKITPIFS PMGIEQDNWP ATVGIITGIF AKEAVVGTLN SLYSTAAPAD 600
  601 EELTPLSESF NAALATIPAN LFGIDLEDPL KLSVGDLTNK EAIAEEQGVA TSTFGALQAG 660
  661 FSGKIAAFSY LLFILLYTPC VAAMGALVHE FGSRWATFAA TWTFSLAYGS ATVVYQAATF 720
  721 TQHPVQSSLW IGFFLFALVA FYQWLKRKGR RTQQIIPGIR IITE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle